Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 RNU1-129P-201ENST00000384064 167 ntBASIC17.07■□□□□ 0.32
CHPFQ8IZ52 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 RBPMS2P1-201ENST00000437762 623 ntBASIC17.07■□□□□ 0.32
CHPFQ8IZ52 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 U1.21-201ENST00000580816 167 ntBASIC17.07■□□□□ 0.32
CHPFQ8IZ52 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 OR6D1P-203ENST00000641209 4860 ntBASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 DUX4L27-201ENST00000554796 1261 ntBASIC17.06■□□□□ 0.32
CHPFQ8IZ52 KRT8P23-201ENST00000560090 1207 ntBASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AC131009.4-201ENST00000624048 1740 ntBASIC17.06■□□□□ 0.32
CHPFQ8IZ52 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AL138688.1-201ENST00000624851 1594 ntBASIC17.06■□□□□ 0.32
CHPFQ8IZ52 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHPFQ8IZ52 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 AP001059.3-201ENST00000619053 235 ntBASIC17.05■□□□□ 0.32
CHPFQ8IZ52 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CHPFQ8IZ52 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHPFQ8IZ52 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms