Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 AL645929.1-201ENST00000420084 975 ntBASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ACTG1P4-201ENST00000425123 1122 ntBASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NUDCD3Q8IVD9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC005521.1-201ENST00000393351 872 ntBASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC246785.2-201ENST00000432512 513 ntBASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUDCD3Q8IVD9 AC011467.2-201ENST00000598425 242 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms