Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 RPS2P1-201ENST00000434010 821 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AC073648.2-201ENST00000510116 352 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 OR7E14P-202ENST00000530490 1290 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AC107918.4-202ENST00000641623 219 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AC006538.1-201ENST00000567905 1585 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 ALOX12P2-203ENST00000570921 1945 ntBASIC17.49■□□□□ 0.39
RFX6Q8HWS3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFX6Q8HWS3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC013467.2-201ENST00000605472 835 ntBASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AF228730.7-201ENST00000641842 219 ntBASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC002310.6-201ENST00000624451 1377 ntBASIC17.48■□□□□ 0.39
RFX6Q8HWS3 AC018695.7-201ENST00000624587 2492 ntBASIC17.48■□□□□ 0.39
RFX6Q8HWS3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFX6Q8HWS3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFX6Q8HWS3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms