Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AC087163.2-201ENST00000457299 853 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AC105020.1-201ENST00000435356 2205 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 GPR89P-201ENST00000407924 1495 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AP003680.1-201ENST00000598970 3660 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AP002414.1-201ENST00000391405 1147 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 AL353135.1-201ENST00000606729 504 ntBASIC14.88□□□□□ -0.03
RTTNQ86VV8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 AC023274.1-201ENST00000418278 595 ntBASIC14.87□□□□□ -0.03
RTTNQ86VV8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 AC116407.3-201ENST00000623905 1129 ntBASIC14.87□□□□□ -0.03
RTTNQ86VV8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 AC104109.2-201ENST00000602919 1418 ntBASIC14.87□□□□□ -0.03
RTTNQ86VV8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RTTNQ86VV8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTTNQ86VV8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 AL591424.1-201ENST00000442569 1213 ntBASIC14.86□□□□□ -0.03
RTTNQ86VV8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 AC006557.2-201ENST00000592985 1240 ntBASIC14.86□□□□□ -0.03
RTTNQ86VV8 FAM197Y3-203ENST00000618346 717 ntBASIC14.86□□□□□ -0.03
RTTNQ86VV8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.86□□□□□ -0.03
RTTNQ86VV8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTTNQ86VV8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms