Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AC015967.2-201ENST00000624092 234 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AC006435.4-201ENST00000625037 234 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AL356737.1-201ENST00000634391 234 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 FLJ13224-201ENST00000313737 1514 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 BTBD6P1-201ENST00000412176 1267 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 RPL7P3-201ENST00000441388 714 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 AC106872.11-201ENST00000605838 421 ntBASIC13.92□□□□□ -0.18
CSMD2Q7Z408 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD2Q7Z408 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 RPL13AP20-201ENST00000459725 609 ntBASIC13.91□□□□□ -0.18
CSMD2Q7Z408 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 AC007613.1-201ENST00000572811 2597 ntBASIC13.91□□□□□ -0.18
CSMD2Q7Z408 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 KRT18P34-201ENST00000488218 1270 ntBASIC13.91□□□□□ -0.18
CSMD2Q7Z408 FAM86HP-204ENST00000513466 959 ntBASIC13.91□□□□□ -0.18
CSMD2Q7Z408 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 MIR5189-201ENST00000577370 114 ntBASIC13.91□□□□□ -0.18
CSMD2Q7Z408 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD2Q7Z408 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms