Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 CR383656.12-201ENST00000549567 513 ntBASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 MIR4453-201ENST00000584019 89 ntBASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 LINC00895-201ENST00000629028 1637 ntBASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC149Q6ZUS6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 PIN1P1-201ENST00000412108 996 ntBASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 AL138918.1-201ENST00000568306 659 ntBASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 AC073592.8-201ENST00000624126 511 ntBASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC149Q6ZUS6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 LINC02012-201ENST00000608206 1725 ntBASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 AC108860.2-201ENST00000562760 2183 ntBASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 AC073389.1-201ENST00000595595 795 ntBASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC149Q6ZUS6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC149Q6ZUS6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC149Q6ZUS6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC149Q6ZUS6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms