Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 AC243562.1-201ENST00000560672 389 ntBASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 OR6D1P-203ENST00000641209 4860 ntBASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDPD4Q6W3E5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 AC016027.1-202ENST00000607927 1699 ntBASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 AC079140.1-201ENST00000508039 487 ntBASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.79■□□□□ 0.28
GDPD4Q6W3E5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDPD4Q6W3E5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms