Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 AC011840.4-201ENST00000578471 627 ntBASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 LINC01451-201ENST00000623792 534 ntBASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FOXR1Q6PIV2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 AL353692.3-201ENST00000407031 1396 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 HLA-A-201ENST00000376802 1334 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 AKR1C7P-201ENST00000305623 895 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 IGHV3-47-201ENST00000425060 335 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 AC013268.4-201ENST00000637413 2228 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.57■□□□□ 0.4
FOXR1Q6PIV2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TSPY12P-201ENST00000421279 868 ntBASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 AC106795.1-205ENST00000512851 1056 ntBASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 DUTP2-201ENST00000519164 463 ntBASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXR1Q6PIV2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 AC016396.2-201ENST00000562575 1417 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms