Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 MIR943-201ENST00000401286 94 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 AC107890.1-201ENST00000422478 521 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 RNA5SP421-201ENST00000516864 134 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 AC021097.1-201ENST00000607902 574 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 AC067852.2-201ENST00000590513 2313 ntBASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AC093214.1-201ENST00000511688 1107 ntBASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AC140878.1-201ENST00000565277 250 ntBASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 AJ011932.1-201ENST00000621707 465 ntBASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC62Q6P9F0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AC092053.1-201ENST00000605787 1936 ntBASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 SPDYE7P-202ENST00000420373 878 ntBASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AC142381.1-201ENST00000426099 345 ntBASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AC125807.1-201ENST00000483097 614 ntBASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC62Q6P9F0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms