Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AP002469.2-201ENST00000531724 424 ntBASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 AC092364.2-201ENST00000596710 2692 ntBASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 OR7E47P-204ENST00000575924 449 ntBASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 GGTLC5P-201ENST00000617623 998 ntBASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 AC005052.1-201ENST00000625181 2492 ntBASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF549Q6P9A3 AC018695.7-201ENST00000624587 2492 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 AC131009.4-201ENST00000624048 1740 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 AL512652.2-201ENST00000625156 1716 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 AC004870.1-201ENST00000315132 882 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 FAAHP1-202ENST00000446499 1238 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 KRT126P-201ENST00000549467 1181 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 MIR7706-201ENST00000613747 67 ntBASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms