Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 AP002469.2-201ENST00000531724 424 ntBASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 FAM215A-202ENST00000632077 792 ntBASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.25■□□□□ 0.19
HIST2H2AA3Q6FI13 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AP002414.3-201ENST00000589352 1468 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AL031284.1-201ENST00000419297 478 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 IGHV3-65-201ENST00000523210 341 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AL662844.1-201ENST00000546340 181 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AC091167.2-201ENST00000579581 588 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AC148477.8-201ENST00000624298 468 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 AP001350.2-201ENST00000625104 1094 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 PCDHA14-201ENST00000506751 2298 ntBASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST2H2AA3Q6FI13 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms