Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC246785.2-201ENST00000432512 513 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC011467.2-201ENST00000598425 242 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC013467.2-201ENST00000605472 835 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC005363.2-201ENST00000618631 242 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AL513477.1-201ENST00000602865 2407 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC092384.3-202ENST00000564646 2873 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 AC073508.3-201ENST00000619697 1419 ntBASIC11.52□□□□□ -0.57
LINC00242Q5T6M2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AC104640.1-201ENST00000562617 2109 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AL603832.2-201ENST00000566195 2125 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AC006277.1-201ENST00000624348 1610 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AP002414.1-201ENST00000391405 1147 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AL645929.1-201ENST00000420084 975 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 NUS1P1-201ENST00000446295 882 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 SIGLEC30P-201ENST00000455569 941 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AC092647.4-201ENST00000457211 535 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AC083849.1-201ENST00000615227 514 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00242Q5T6M2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms