Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
VARS2Q5ST30 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 FZD10-202ENST00000539839 3282 ntBASIC17.72■□□□□ 0.43
VARS2Q5ST30 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 KLF2P3-201ENST00000451977 1087 ntBASIC17.72■□□□□ 0.43
VARS2Q5ST30 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ALG1L8P-201ENST00000533887 760 ntBASIC17.72■□□□□ 0.43
VARS2Q5ST30 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 AL035252.4-201ENST00000624174 288 ntBASIC17.72■□□□□ 0.43
VARS2Q5ST30 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARS2Q5ST30 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 SPDYE7P-202ENST00000420373 878 ntBASIC17.71■□□□□ 0.43
VARS2Q5ST30 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VARS2Q5ST30 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VARS2Q5ST30 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VARS2Q5ST30 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
VARS2Q5ST30 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
VARS2Q5ST30 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
VARS2Q5ST30 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARS2Q5ST30 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.7■□□□□ 0.42
VARS2Q5ST30 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms