Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 AC132872.4-202ENST00000622924 2756 ntBASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 LINC02012-201ENST00000608206 1725 ntBASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 KRT18P67-201ENST00000432816 1264 ntBASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 FDX1P1-201ENST00000449115 551 ntBASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 AC002558.1-201ENST00000488906 803 ntBASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCGF3Q3KNV8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 PMPCAP1-201ENST00000508114 1576 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 CYP2T1P-202ENST00000641596 2535 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 AC092068.3-201ENST00000587894 2016 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 AC093909.1-201ENST00000504731 1122 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 AL773604.1-201ENST00000617417 272 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 AC078925.2-201ENST00000624013 1973 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 LINC00554-201ENST00000564841 3011 ntBASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PCGF3Q3KNV8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms