Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP2B3Q16720 AL627223.1-201ENST00000416693 442 ntBASIC20.53■□□□□ 0.88
ATP2B3Q16720 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP2B3Q16720 AL592309.1-201ENST00000443127 649 ntBASIC20.53■□□□□ 0.88
ATP2B3Q16720 AC023141.5-201ENST00000458585 616 ntBASIC20.53■□□□□ 0.88
ATP2B3Q16720 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 LINC00895-201ENST00000629028 1637 ntBASIC20.53■□□□□ 0.88
ATP2B3Q16720 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATP2B3Q16720 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATP2B3Q16720 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2B3Q16720 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AC016027.1-202ENST00000607927 1699 ntBASIC20.52■□□□□ 0.88
ATP2B3Q16720 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 SPCS2P4-201ENST00000436160 681 ntBASIC20.52■□□□□ 0.88
ATP2B3Q16720 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AC027796.2-201ENST00000575326 344 ntBASIC20.52■□□□□ 0.88
ATP2B3Q16720 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.52■□□□□ 0.88
ATP2B3Q16720 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2B3Q16720 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2B3Q16720 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ATP2B3Q16720 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2B3Q16720 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ATP2B3Q16720 AL671710.1-201ENST00000610245 2349 ntBASIC20.52■□□□□ 0.87
ATP2B3Q16720 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC005237.2-201ENST00000434368 219 ntBASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2B3Q16720 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP2B3Q16720 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms