Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TP73-AS1-210ENST00000637775 1455 ntBASIC12.93□□□□□ -0.34
HIST1H1AQ02539 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AP005901.3-202ENST00000581653 237 ntBASIC12.93□□□□□ -0.34
HIST1H1AQ02539 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AP002414.4-201ENST00000589764 1148 ntBASIC12.93□□□□□ -0.34
HIST1H1AQ02539 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 AC116407.4-201ENST00000623319 1061 ntBASIC12.93□□□□□ -0.34
HIST1H1AQ02539 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1AQ02539 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 SLC25A1P3-201ENST00000395415 828 ntBASIC12.92□□□□□ -0.34
HIST1H1AQ02539 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AC011467.2-201ENST00000598425 242 ntBASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AC073592.5-201ENST00000624854 528 ntBASIC12.92□□□□□ -0.34
HIST1H1AQ02539 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1AQ02539 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1AQ02539 EGFEM1P-202ENST00000431685 1563 ntBASIC12.91□□□□□ -0.34
HIST1H1AQ02539 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms