Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC124947.2-201ENST00000547118 1133 ntBASIC16.38■□□□□ 0.21
YBX1P67809 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.38■□□□□ 0.21
YBX1P67809 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
YBX1P67809 PAUPAR-201ENST00000630360 2965 ntBASIC16.38■□□□□ 0.21
YBX1P67809 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.38■□□□□ 0.21
YBX1P67809 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 AL645728.1-201ENST00000366221 2101 ntBASIC16.37■□□□□ 0.21
YBX1P67809 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.37■□□□□ 0.21
YBX1P67809 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
YBX1P67809 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
YBX1P67809 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 MRPL20P1-201ENST00000400819 433 ntBASIC16.37■□□□□ 0.21
YBX1P67809 MIR940-201ENST00000401276 94 ntBASIC16.37■□□□□ 0.21
YBX1P67809 VN2R19P-201ENST00000442399 1052 ntBASIC16.37■□□□□ 0.21
YBX1P67809 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.37■□□□□ 0.21
YBX1P67809 GGTLC5P-201ENST00000617623 998 ntBASIC16.37■□□□□ 0.21
YBX1P67809 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.37■□□□□ 0.21
YBX1P67809 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
YBX1P67809 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
YBX1P67809 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
YBX1P67809 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YBX1P67809 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.36■□□□□ 0.21
YBX1P67809 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 POLD2P1-201ENST00000511220 997 ntBASIC16.36■□□□□ 0.21
YBX1P67809 AC018845.2-201ENST00000568326 409 ntBASIC16.36■□□□□ 0.21
YBX1P67809 AC140113.2-201ENST00000604370 208 ntBASIC16.36■□□□□ 0.21
YBX1P67809 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
YBX1P67809 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.36■□□□□ 0.21
YBX1P67809 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YBX1P67809 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 ALOX12P2-203ENST00000570921 1945 ntBASIC16.35■□□□□ 0.21
YBX1P67809 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms