Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPS3AP61247 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.82■□□□□ 0.12
RPS3AP61247 AC026396.1-201ENST00000419388 421 ntBASIC15.82■□□□□ 0.12
RPS3AP61247 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 AL160237.2-201ENST00000556165 472 ntBASIC15.82■□□□□ 0.12
RPS3AP61247 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.82■□□□□ 0.12
RPS3AP61247 AP001269.4-201ENST00000609611 512 ntBASIC15.82■□□□□ 0.12
RPS3AP61247 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 AL031008.1-201ENST00000619963 541 ntBASIC15.82■□□□□ 0.12
RPS3AP61247 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.82■□□□□ 0.12
RPS3AP61247 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS3AP61247 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPS3AP61247 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPS3AP61247 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS3AP61247 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.81■□□□□ 0.12
RPS3AP61247 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RPS3AP61247 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.81■□□□□ 0.12
RPS3AP61247 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
RPS3AP61247 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.81■□□□□ 0.12
RPS3AP61247 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.81■□□□□ 0.12
RPS3AP61247 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS3AP61247 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS3AP61247 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RPS3AP61247 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.8■□□□□ 0.12
RPS3AP61247 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS3AP61247 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS3AP61247 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS3AP61247 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS3AP61247 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.8■□□□□ 0.12
RPS3AP61247 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPS3AP61247 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS3AP61247 AC092384.3-202ENST00000564646 2873 ntBASIC15.8■□□□□ 0.12
RPS3AP61247 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 AC092171.3-201ENST00000610122 2651 ntBASIC15.8■□□□□ 0.12
RPS3AP61247 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.8■□□□□ 0.12
RPS3AP61247 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPS3AP61247 MYCLP1-201ENST00000372451 1075 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms