Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MTCL1P1-201ENST00000446207 792 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
AP3S2P59780 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.47□□□□□ -0.09
AP3S2P59780 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.47□□□□□ -0.09
AP3S2P59780 AC104771.1-201ENST00000603335 964 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 AC019129.2-201ENST00000609837 1235 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 REXO1L10P-201ENST00000615707 1290 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.47□□□□□ -0.09
AP3S2P59780 REXO1L12P-201ENST00000622156 912 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 AC073347.1-201ENST00000421633 2643 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 LINC00895-201ENST00000629028 1637 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 AP005117.1-202ENST00000581724 1908 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.46□□□□□ -0.09
AP3S2P59780 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.46□□□□□ -0.09
AP3S2P59780 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.46□□□□□ -0.09
AP3S2P59780 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.46□□□□□ -0.09
AP3S2P59780 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.46□□□□□ -0.09
AP3S2P59780 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.46□□□□□ -0.09
AP3S2P59780 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.46□□□□□ -0.09
AP3S2P59780 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.46□□□□□ -0.09
AP3S2P59780 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.46□□□□□ -0.09
AP3S2P59780 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.46□□□□□ -0.09
AP3S2P59780 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.46□□□□□ -0.09
AP3S2P59780 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP3S2P59780 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP3S2P59780 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP3S2P59780 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
AP3S2P59780 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP3S2P59780 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP3S2P59780 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP3S2P59780 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
AP3S2P59780 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.46□□□□□ -0.1
AP3S2P59780 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 AP000523.1-201ENST00000398242 1049 ntBASIC14.45□□□□□ -0.1
AP3S2P59780 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S2P59780 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 UBE2SP1-201ENST00000450587 669 ntBASIC14.45□□□□□ -0.1
AP3S2P59780 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S2P59780 RPPH1-201ENST00000516869 333 ntBASIC14.45□□□□□ -0.1
AP3S2P59780 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S2P59780 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 AC006058.3-201ENST00000606217 1069 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms