Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00315P59091 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00315P59091 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00315P59091 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00315P59091 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00315P59091 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00315P59091 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00315P59091 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 GGT3P-204ENST00000453783 1664 ntBASIC12.11□□□□□ -0.47
LINC00315P59091 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 POM121L3P-201ENST00000419331 1163 ntBASIC12.11□□□□□ -0.47
LINC00315P59091 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00315P59091 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00315P59091 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00315P59091 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00315P59091 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 BNIP3P18-201ENST00000593976 575 ntBASIC12.11□□□□□ -0.47
LINC00315P59091 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 AL603832.2-201ENST00000566195 2125 ntBASIC12.11□□□□□ -0.47
LINC00315P59091 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00315P59091 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00315P59091 SIGLEC16-201ENST00000599858 1437 ntBASIC12.11□□□□□ -0.47
LINC00315P59091 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00315P59091 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 AC097637.2-201ENST00000624096 1997 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 AC103702.1-201ENST00000548801 2630 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 SNX33P1-201ENST00000592116 1762 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 LINC00982-205ENST00000420957 435 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 AC079781.3-201ENST00000449110 356 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 SAPCD2P3-201ENST00000455031 850 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00315P59091 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00315P59091 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00315P59091 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 AC114341.1-201ENST00000618070 349 ntBASIC12.1□□□□□ -0.47
LINC00315P59091 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00315P59091 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00315P59091 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms