Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLDN12P56749 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 AC092384.3-202ENST00000564646 2873 ntBASIC14.66□□□□□ -0.06
CLDN12P56749 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 AC006538.1-201ENST00000567905 1585 ntBASIC14.66□□□□□ -0.06
CLDN12P56749 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.66□□□□□ -0.06
CLDN12P56749 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 KLF4P1-201ENST00000412782 1185 ntBASIC14.66□□□□□ -0.06
CLDN12P56749 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN12P56749 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CLDN12P56749 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.66□□□□□ -0.06
CLDN12P56749 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 AC124864.1-201ENST00000623408 392 ntBASIC14.66□□□□□ -0.06
CLDN12P56749 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN12P56749 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN12P56749 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN12P56749 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN12P56749 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.65□□□□□ -0.06
CLDN12P56749 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CLDN12P56749 AL845331.1-201ENST00000424978 1190 ntBASIC14.65□□□□□ -0.06
CLDN12P56749 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN12P56749 AC117947.1-201ENST00000427448 529 ntBASIC14.65□□□□□ -0.06
CLDN12P56749 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN12P56749 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN12P56749 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN12P56749 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 HYMAI.1-201ENST00000620949 238 ntBASIC14.65□□□□□ -0.06
CLDN12P56749 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 AL596087.1-201ENST00000400979 1969 ntBASIC14.65□□□□□ -0.06
CLDN12P56749 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN12P56749 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN12P56749 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
CLDN12P56749 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CLDN12P56749 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN12P56749 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLDN12P56749 FLJ16779-201ENST00000612722 7638 ntBASIC14.64□□□□□ -0.07
CLDN12P56749 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLDN12P56749 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
CLDN12P56749 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLDN12P56749 AC003669.1-201ENST00000334569 611 ntBASIC14.64□□□□□ -0.07
CLDN12P56749 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CLDN12P56749 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN12P56749 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
CLDN12P56749 AC087499.1-201ENST00000418141 1075 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms