Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
CMC4P56277 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.49□□□□□ -0.41
CMC4P56277 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.49□□□□□ -0.41
CMC4P56277 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CMC4P56277 AC092053.1-201ENST00000605787 1936 ntBASIC12.49□□□□□ -0.41
CMC4P56277 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
CMC4P56277 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.49□□□□□ -0.41
CMC4P56277 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.49□□□□□ -0.41
CMC4P56277 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CMC4P56277 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 MKNK2P1-201ENST00000437526 628 ntBASIC12.49□□□□□ -0.41
CMC4P56277 AC140658.5-201ENST00000438532 169 ntBASIC12.49□□□□□ -0.41
CMC4P56277 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.49□□□□□ -0.41
CMC4P56277 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.49□□□□□ -0.41
CMC4P56277 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 POLD2P1-201ENST00000511220 997 ntBASIC12.49□□□□□ -0.41
CMC4P56277 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.49□□□□□ -0.41
CMC4P56277 AC020765.3-201ENST00000613051 740 ntBASIC12.49□□□□□ -0.41
CMC4P56277 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CMC4P56277 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 AP001094.4-201ENST00000579008 2176 ntBASIC12.49□□□□□ -0.41
CMC4P56277 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.49□□□□□ -0.41
CMC4P56277 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CMC4P56277 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMC4P56277 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CMC4P56277 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 AC020916.1-201ENST00000587762 1774 ntBASIC12.48□□□□□ -0.41
CMC4P56277 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.48□□□□□ -0.41
CMC4P56277 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.48□□□□□ -0.41
CMC4P56277 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CMC4P56277 HMGA1P7-201ENST00000406908 502 ntBASIC12.48□□□□□ -0.41
CMC4P56277 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CMC4P56277 KRT18P2-201ENST00000447938 1258 ntBASIC12.48□□□□□ -0.41
CMC4P56277 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.48□□□□□ -0.41
CMC4P56277 AC109635.5-201ENST00000533593 962 ntBASIC12.48□□□□□ -0.41
CMC4P56277 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.48□□□□□ -0.41
CMC4P56277 C20orf181-201ENST00000623918 480 ntBASIC12.48□□□□□ -0.41
CMC4P56277 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CMC4P56277 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.48□□□□□ -0.41
CMC4P56277 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.48□□□□□ -0.41
CMC4P56277 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CMC4P56277 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms