Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDE1AP54750 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE1AP54750 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
PDE1AP54750 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.45■□□□□ 0.87
PDE1AP54750 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
PDE1AP54750 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.45■□□□□ 0.86
PDE1AP54750 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
PDE1AP54750 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDE1AP54750 GPAA1P2-202ENST00000606848 1787 ntBASIC20.45■□□□□ 0.86
PDE1AP54750 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.45■□□□□ 0.86
PDE1AP54750 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.45■□□□□ 0.86
PDE1AP54750 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 AL513480.1-201ENST00000451731 511 ntBASIC20.45■□□□□ 0.86
PDE1AP54750 RPL13AP23-201ENST00000480739 586 ntBASIC20.45■□□□□ 0.86
PDE1AP54750 AC096734.2-201ENST00000562054 433 ntBASIC20.45■□□□□ 0.86
PDE1AP54750 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.45■□□□□ 0.86
PDE1AP54750 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.45■□□□□ 0.86
PDE1AP54750 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDE1AP54750 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE1AP54750 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PDE1AP54750 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PDE1AP54750 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.44■□□□□ 0.86
PDE1AP54750 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.44■□□□□ 0.86
PDE1AP54750 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
PDE1AP54750 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDE1AP54750 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.44■□□□□ 0.86
PDE1AP54750 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE1AP54750 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDE1AP54750 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE1AP54750 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PDE1AP54750 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE1AP54750 RNU1-129P-201ENST00000384064 167 ntBASIC20.43■□□□□ 0.86
PDE1AP54750 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 KRT18P2-201ENST00000447938 1258 ntBASIC20.43■□□□□ 0.86
PDE1AP54750 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.43■□□□□ 0.86
PDE1AP54750 SLC25A1P1-201ENST00000528351 927 ntBASIC20.43■□□□□ 0.86
PDE1AP54750 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.43■□□□□ 0.86
PDE1AP54750 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.43■□□□□ 0.86
PDE1AP54750 U1.21-201ENST00000580816 167 ntBASIC20.43■□□□□ 0.86
PDE1AP54750 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.43■□□□□ 0.86
PDE1AP54750 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDE1AP54750 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDE1AP54750 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms