Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.64□□□□□ -0.07
ATP1B3P54709 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AL591684.3-201ENST00000605187 298 ntBASIC14.64□□□□□ -0.07
ATP1B3P54709 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.64□□□□□ -0.07
ATP1B3P54709 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 SIGLEC16-201ENST00000599858 1437 ntBASIC14.64□□□□□ -0.07
ATP1B3P54709 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 RNF216P1-203ENST00000404404 2427 ntBASIC14.63□□□□□ -0.07
ATP1B3P54709 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ATP1B3P54709 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.63□□□□□ -0.07
ATP1B3P54709 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
ATP1B3P54709 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.63□□□□□ -0.07
ATP1B3P54709 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.63□□□□□ -0.07
ATP1B3P54709 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.63□□□□□ -0.07
ATP1B3P54709 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 NUS1P1-201ENST00000446295 882 ntBASIC14.63□□□□□ -0.07
ATP1B3P54709 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.63□□□□□ -0.07
ATP1B3P54709 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.63□□□□□ -0.07
ATP1B3P54709 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.63□□□□□ -0.07
ATP1B3P54709 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 NPAP1P7-201ENST00000613027 823 ntBASIC14.63□□□□□ -0.07
ATP1B3P54709 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.63□□□□□ -0.07
ATP1B3P54709 AL358472.4-201ENST00000633140 710 ntBASIC14.63□□□□□ -0.07
ATP1B3P54709 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ATP1B3P54709 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ATP1B3P54709 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 AC092171.3-201ENST00000610122 2651 ntBASIC14.63□□□□□ -0.07
ATP1B3P54709 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.63□□□□□ -0.07
ATP1B3P54709 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATP1B3P54709 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATP1B3P54709 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATP1B3P54709 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.62□□□□□ -0.07
ATP1B3P54709 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 AL021920.2-201ENST00000624828 1351 ntBASIC14.62□□□□□ -0.07
ATP1B3P54709 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.62□□□□□ -0.07
ATP1B3P54709 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 AC022188.1-201ENST00000620960 1664 ntBASIC14.62□□□□□ -0.07
ATP1B3P54709 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATP1B3P54709 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms