Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL592309.1-201ENST00000443127 649 ntBASIC16.3■□□□□ 0.2
PDX1P52945 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
PDX1P52945 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.3■□□□□ 0.2
PDX1P52945 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.3■□□□□ 0.2
PDX1P52945 RARRES2P8-201ENST00000566335 367 ntBASIC16.3■□□□□ 0.2
PDX1P52945 AC051619.7-201ENST00000568314 623 ntBASIC16.3■□□□□ 0.2
PDX1P52945 MIR4745-201ENST00000577608 62 ntBASIC16.3■□□□□ 0.2
PDX1P52945 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
PDX1P52945 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDX1P52945 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.3■□□□□ 0.2
PDX1P52945 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDX1P52945 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDX1P52945 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 HMGA1P7-201ENST00000406908 502 ntBASIC16.29■□□□□ 0.2
PDX1P52945 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.29■□□□□ 0.2
PDX1P52945 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.29■□□□□ 0.2
PDX1P52945 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.29■□□□□ 0.2
PDX1P52945 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
PDX1P52945 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.29■□□□□ 0.2
PDX1P52945 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDX1P52945 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PDX1P52945 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 KRT18P32-201ENST00000424695 1287 ntBASIC16.28■□□□□ 0.2
PDX1P52945 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.28■□□□□ 0.2
PDX1P52945 SPCS2P4-201ENST00000436160 681 ntBASIC16.28■□□□□ 0.2
PDX1P52945 AC067863.1-201ENST00000494933 530 ntBASIC16.28■□□□□ 0.2
PDX1P52945 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.28■□□□□ 0.2
PDX1P52945 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.28■□□□□ 0.2
PDX1P52945 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 AL512356.2-201ENST00000546955 174 ntBASIC16.28■□□□□ 0.2
PDX1P52945 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PDX1P52945 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDX1P52945 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms