Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 AC108751.1-201ENST00000490852 363 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 RNA5SP419-201ENST00000515908 135 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 MIR4751-201ENST00000578027 74 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 AC091167.2-201ENST00000579581 588 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 AL121894.2-201ENST00000602977 491 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSNK1A1P48729 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CSNK1A1P48729 FLJ38576-201ENST00000623820 2459 ntBASIC14.97□□□□□ -0.01
CSNK1A1P48729 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 MPDU1-223ENST00000582151 728 ntBASIC14.96□□□□□ -0.01
CSNK1A1P48729 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 AC004790.2-201ENST00000623588 572 ntBASIC14.96□□□□□ -0.01
CSNK1A1P48729 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CSNK1A1P48729 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1A1P48729 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1A1P48729 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1A1P48729 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1A1P48729 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CSNK1A1P48729 AC006277.1-201ENST00000624348 1610 ntBASIC14.95□□□□□ -0.02
CSNK1A1P48729 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 AL603756.1-201ENST00000606511 2163 ntBASIC14.95□□□□□ -0.02
CSNK1A1P48729 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 HLA-A-201ENST00000376802 1334 ntBASIC14.95□□□□□ -0.02
CSNK1A1P48729 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CSNK1A1P48729 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1A1P48729 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms