Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LINC01711-201ENST00000598340 967 ntBASIC16.33■□□□□ 0.2
KRT6CP48668 AC008608.2-201ENST00000606089 416 ntBASIC16.33■□□□□ 0.2
KRT6CP48668 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
KRT6CP48668 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 TSPY19P-201ENST00000418461 509 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 TSPY18P-201ENST00000441642 509 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT6CP48668 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 PRELID1P1-202ENST00000567272 903 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6CP48668 AC013467.2-201ENST00000605472 835 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT6CP48668 AL139011.1-202ENST00000642063 584 ntBASIC16.32■□□□□ 0.2
KRT6CP48668 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT6CP48668 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT6CP48668 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
KRT6CP48668 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6CP48668 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 AC006277.1-201ENST00000624348 1610 ntBASIC16.31■□□□□ 0.2
KRT6CP48668 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6CP48668 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
KRT6CP48668 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KRT6CP48668 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6CP48668 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.31■□□□□ 0.2
KRT6CP48668 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT6CP48668 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 MTDHP4-201ENST00000600287 670 ntBASIC16.31■□□□□ 0.2
KRT6CP48668 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6CP48668 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6CP48668 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6CP48668 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6CP48668 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms