Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC002056.1-201ENST00000395613 760 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC004832.2-201ENST00000426397 482 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.41■□□□□ 0.38
SCNN1AP37088 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC002347.1-201ENST00000569543 541 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.41■□□□□ 0.38
SCNN1AP37088 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.41■□□□□ 0.38
SCNN1AP37088 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.41■□□□□ 0.38
SCNN1AP37088 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
SCNN1AP37088 PCGF3-213ENST00000620529 1899 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 PCDHA14-201ENST00000506751 2298 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SCNN1AP37088 AC092171.3-201ENST00000610122 2651 ntBASIC17.41■□□□□ 0.38
SCNN1AP37088 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCNN1AP37088 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
SCNN1AP37088 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SCNN1AP37088 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SCNN1AP37088 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SCNN1AP37088 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCNN1AP37088 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 MCCD1P2-201ENST00000423228 335 ntBASIC17.4■□□□□ 0.38
SCNN1AP37088 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.4■□□□□ 0.38
SCNN1AP37088 POU5F1P6-201ENST00000466990 990 ntBASIC17.4■□□□□ 0.38
SCNN1AP37088 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.4■□□□□ 0.38
SCNN1AP37088 AL161645.1-201ENST00000622716 1255 ntBASIC17.4■□□□□ 0.38
SCNN1AP37088 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCNN1AP37088 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.4■□□□□ 0.38
SCNN1AP37088 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCNN1AP37088 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 UBALD1-205ENST00000590891 2641 ntBASIC17.4■□□□□ 0.38
SCNN1AP37088 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCNN1AP37088 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.4■□□□□ 0.38
SCNN1AP37088 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SCNN1AP37088 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.39■□□□□ 0.38
SCNN1AP37088 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SCNN1AP37088 AL118508.1-201ENST00000613502 2345 ntBASIC17.39■□□□□ 0.38
SCNN1AP37088 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCNN1AP37088 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.39■□□□□ 0.37
SCNN1AP37088 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SCNN1AP37088 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SCNN1AP37088 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.39■□□□□ 0.37
SCNN1AP37088 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 AP000347.1-202ENST00000435868 847 ntBASIC17.39■□□□□ 0.37
SCNN1AP37088 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.39■□□□□ 0.37
SCNN1AP37088 AC112191.1-201ENST00000523689 701 ntBASIC17.39■□□□□ 0.37
SCNN1AP37088 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.39■□□□□ 0.37
SCNN1AP37088 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.39■□□□□ 0.37
SCNN1AP37088 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.39■□□□□ 0.37
SCNN1AP37088 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCNN1AP37088 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.39■□□□□ 0.37
SCNN1AP37088 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 PMS2P7-201ENST00000506558 1336 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms