Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LSP1P33241 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LSP1P33241 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
LSP1P33241 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.89■□□□□ 0.3
LSP1P33241 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LSP1P33241 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LSP1P33241 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 AC012618.2-201ENST00000428058 849 ntBASIC16.89■□□□□ 0.29
LSP1P33241 AC007663.1-201ENST00000438948 1240 ntBASIC16.89■□□□□ 0.29
LSP1P33241 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.89■□□□□ 0.29
LSP1P33241 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 AC008550.1-201ENST00000511500 884 ntBASIC16.89■□□□□ 0.29
LSP1P33241 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.89■□□□□ 0.29
LSP1P33241 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.89■□□□□ 0.29
LSP1P33241 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.89■□□□□ 0.29
LSP1P33241 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.89■□□□□ 0.29
LSP1P33241 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.89■□□□□ 0.29
LSP1P33241 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.89■□□□□ 0.29
LSP1P33241 SSR4P1-203ENST00000599569 2260 ntBASIC16.89■□□□□ 0.29
LSP1P33241 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSP1P33241 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.88■□□□□ 0.29
LSP1P33241 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LSP1P33241 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LSP1P33241 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.88■□□□□ 0.29
LSP1P33241 AC009947.2-201ENST00000444014 672 ntBASIC16.88■□□□□ 0.29
LSP1P33241 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.88■□□□□ 0.29
LSP1P33241 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 DUX4L17-201ENST00000557360 1267 ntBASIC16.88■□□□□ 0.29
LSP1P33241 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.88■□□□□ 0.29
LSP1P33241 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 REXO1L10P-201ENST00000615707 1290 ntBASIC16.88■□□□□ 0.29
LSP1P33241 REXO1L12P-201ENST00000622156 912 ntBASIC16.88■□□□□ 0.29
LSP1P33241 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.88■□□□□ 0.29
LSP1P33241 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LSP1P33241 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSP1P33241 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LSP1P33241 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.87■□□□□ 0.29
LSP1P33241 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.87■□□□□ 0.29
LSP1P33241 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.87■□□□□ 0.29
LSP1P33241 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.87■□□□□ 0.29
LSP1P33241 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.87■□□□□ 0.29
LSP1P33241 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSP1P33241 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms