Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.68■□□□□ 0.1
NR4A1P22736 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR4A1P22736 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.68■□□□□ 0.1
NR4A1P22736 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.68■□□□□ 0.1
NR4A1P22736 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR4A1P22736 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.68■□□□□ 0.1
NR4A1P22736 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
NR4A1P22736 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.67■□□□□ 0.1
NR4A1P22736 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NR4A1P22736 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.67■□□□□ 0.1
NR4A1P22736 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.67■□□□□ 0.1
NR4A1P22736 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.67■□□□□ 0.1
NR4A1P22736 CHCHD2P8-201ENST00000429873 447 ntBASIC15.67■□□□□ 0.1
NR4A1P22736 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.67■□□□□ 0.1
NR4A1P22736 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.67■□□□□ 0.1
NR4A1P22736 AC090616.6-201ENST00000582640 721 ntBASIC15.67■□□□□ 0.1
NR4A1P22736 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.67■□□□□ 0.1
NR4A1P22736 AC004263.2-201ENST00000617183 678 ntBASIC15.67■□□□□ 0.1
NR4A1P22736 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.67■□□□□ 0.1
NR4A1P22736 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.67■□□□□ 0.1
NR4A1P22736 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR4A1P22736 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NR4A1P22736 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 ATP5G2P1-201ENST00000433580 426 ntBASIC15.66■□□□□ 0.1
NR4A1P22736 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.66■□□□□ 0.1
NR4A1P22736 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.66■□□□□ 0.1
NR4A1P22736 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.66■□□□□ 0.1
NR4A1P22736 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.66■□□□□ 0.1
NR4A1P22736 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms