Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 AC020907.1-201ENST00000616460 1350 ntBASIC16.42■□□□□ 0.22
SDHBP21912 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 AC020916.1-201ENST00000587762 1774 ntBASIC16.42■□□□□ 0.22
SDHBP21912 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.42■□□□□ 0.22
SDHBP21912 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.42■□□□□ 0.22
SDHBP21912 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.42■□□□□ 0.22
SDHBP21912 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 AC009407.1-201ENST00000568958 598 ntBASIC16.42■□□□□ 0.22
SDHBP21912 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SDHBP21912 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.42■□□□□ 0.22
SDHBP21912 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SDHBP21912 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.41■□□□□ 0.22
SDHBP21912 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SDHBP21912 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SDHBP21912 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.41■□□□□ 0.22
SDHBP21912 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 AC107918.2-201ENST00000530817 355 ntBASIC16.41■□□□□ 0.22
SDHBP21912 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.41■□□□□ 0.22
SDHBP21912 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.41■□□□□ 0.22
SDHBP21912 MIR4538-201ENST00000581377 78 ntBASIC16.41■□□□□ 0.22
SDHBP21912 MIR6869-201ENST00000619434 62 ntBASIC16.41■□□□□ 0.22
SDHBP21912 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SDHBP21912 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.41■□□□□ 0.22
SDHBP21912 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
SDHBP21912 CETN4P-206ENST00000642099 2168 ntBASIC16.41■□□□□ 0.22
SDHBP21912 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SDHBP21912 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
SDHBP21912 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SDHBP21912 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.4■□□□□ 0.22
SDHBP21912 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHBP21912 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SDHBP21912 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHBP21912 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHBP21912 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHBP21912 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.4■□□□□ 0.22
SDHBP21912 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.4■□□□□ 0.22
SDHBP21912 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SDHBP21912 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms