Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.95■□□□□ 0.3
VCLP18206 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.95■□□□□ 0.3
VCLP18206 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
VCLP18206 ELK2BP-201ENST00000415014 1224 ntBASIC16.95■□□□□ 0.3
VCLP18206 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.95■□□□□ 0.3
VCLP18206 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 AL603756.1-201ENST00000606511 2163 ntBASIC16.95■□□□□ 0.3
VCLP18206 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VCLP18206 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.94■□□□□ 0.3
VCLP18206 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.94■□□□□ 0.3
VCLP18206 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VCLP18206 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 AC073621.1-201ENST00000392730 636 ntBASIC16.94■□□□□ 0.3
VCLP18206 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.94■□□□□ 0.3
VCLP18206 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.94■□□□□ 0.3
VCLP18206 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.94■□□□□ 0.3
VCLP18206 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
VCLP18206 AC117500.6-201ENST00000624871 588 ntBASIC16.94■□□□□ 0.3
VCLP18206 AL805961.1-202ENST00000641562 540 ntBASIC16.94■□□□□ 0.3
VCLP18206 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VCLP18206 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VCLP18206 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VCLP18206 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 AC006504.4-201ENST00000592118 1568 ntBASIC16.94■□□□□ 0.3
VCLP18206 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.94■□□□□ 0.3
VCLP18206 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VCLP18206 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCLP18206 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.93■□□□□ 0.3
VCLP18206 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.93■□□□□ 0.3
VCLP18206 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 RPL13AP23-201ENST00000480739 586 ntBASIC16.93■□□□□ 0.3
VCLP18206 RPS15P9-201ENST00000494093 319 ntBASIC16.93■□□□□ 0.3
VCLP18206 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 IGHV3-22-201ENST00000520721 359 ntBASIC16.93■□□□□ 0.3
VCLP18206 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.93■□□□□ 0.3
VCLP18206 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.93■□□□□ 0.3
VCLP18206 GGTLC5P-201ENST00000617623 998 ntBASIC16.93■□□□□ 0.3
VCLP18206 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
VCLP18206 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms