Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPRFP10586 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPRFP10586 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 AC004461.2-201ENST00000629517 803 ntBASIC18.98■□□□□ 0.63
PTPRFP10586 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTPRFP10586 PP12613-201ENST00000424958 2230 ntBASIC18.98■□□□□ 0.63
PTPRFP10586 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPRFP10586 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPRFP10586 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPRFP10586 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPRFP10586 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 AL391069.4-201ENST00000609583 481 ntBASIC18.98■□□□□ 0.63
PTPRFP10586 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.98■□□□□ 0.63
PTPRFP10586 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPRFP10586 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPRFP10586 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPRFP10586 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPRFP10586 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPRFP10586 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPRFP10586 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPRFP10586 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPRFP10586 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPRFP10586 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPRFP10586 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPRFP10586 AC106886.1-201ENST00000568660 600 ntBASIC18.97■□□□□ 0.63
PTPRFP10586 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPRFP10586 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPRFP10586 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPRFP10586 GPAA1P2-202ENST00000606848 1787 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPRFP10586 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPRFP10586 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPRFP10586 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PTPRFP10586 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 RPS2P32-201ENST00000439199 892 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 AC007389.4-201ENST00000454674 793 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.96■□□□□ 0.63
PTPRFP10586 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPRFP10586 MIR6805-201ENST00000615055 62 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 AL033527.4-201ENST00000641026 673 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 AL033527.5-202ENST00000641632 1098 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 NOC2LP2-201ENST00000407594 1944 ntBASIC18.96■□□□□ 0.63
PTPRFP10586 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPRFP10586 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPRFP10586 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTPRFP10586 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPRFP10586 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPRFP10586 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPRFP10586 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPRFP10586 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms