Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMGN1P05114 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 SPDYE21P-201ENST00000413323 827 ntBASIC15.26■□□□□ 0.03
HMGN1P05114 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGN1P05114 AP005901.3-202ENST00000581653 237 ntBASIC15.26■□□□□ 0.03
HMGN1P05114 LINC01023-201ENST00000606054 436 ntBASIC15.26■□□□□ 0.03
HMGN1P05114 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMGN1P05114 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.26■□□□□ 0.03
HMGN1P05114 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
HMGN1P05114 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGN1P05114 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
HMGN1P05114 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGN1P05114 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
HMGN1P05114 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 AC233702.3-201ENST00000578656 1387 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 AC006277.1-201ENST00000624348 1610 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGN1P05114 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGN1P05114 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGN1P05114 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGN1P05114 AC211429.1-201ENST00000415277 523 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 LINC00982-205ENST00000420957 435 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 AP000867.4-201ENST00000641616 219 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 FLJ16779-201ENST00000612722 7638 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGN1P05114 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGN1P05114 SIGLEC16-201ENST00000599858 1437 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGN1P05114 AC148477.5-201ENST00000625164 1645 ntBASIC15.25■□□□□ 0.03
HMGN1P05114 AL365203.3-201ENST00000609742 2057 ntBASIC15.24■□□□□ 0.03
HMGN1P05114 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGN1P05114 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
HMGN1P05114 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGN1P05114 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HMGN1P05114 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGN1P05114 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGN1P05114 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms