Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AC006538.1-201ENST00000567905 1585 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AC233702.3-201ENST00000578656 1387 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 VENTXP7-201ENST00000475503 772 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AP000867.3-201ENST00000524675 377 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AC092329.2-201ENST00000598402 547 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 FRMD8P1-201ENST00000440433 1524 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TUBB8P12-201ENST00000308911 1335 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TUBB7P-202ENST00000428444 1305 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 TUBB8P7-204ENST00000567960 1332 ntBASIC15.16■□□□□ 0.02
HLA-DPB1P04440 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ATP5G2P1-201ENST00000433580 426 ntBASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AL353801.3-201ENST00000609898 542 ntBASIC15.15■□□□□ 0.02
HLA-DPB1P04440 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPB1P04440 AC010460.3-201ENST00000511359 1579 ntBASIC15.15■□□□□ 0.02
HLA-DPB1P04440 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPB1P04440 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms