Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 AC093214.1-201ENST00000511688 1107 ntBASIC15.75■□□□□ 0.11
PDGFAP04085 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 AC022211.2-201ENST00000585075 2527 ntBASIC15.75■□□□□ 0.11
PDGFAP04085 AL135999.2-201ENST00000622438 1686 ntBASIC15.75■□□□□ 0.11
PDGFAP04085 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PDGFAP04085 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 AC002056.1-201ENST00000395613 760 ntBASIC15.74■□□□□ 0.11
PDGFAP04085 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 AL671277.1-201ENST00000429656 993 ntBASIC15.74■□□□□ 0.11
PDGFAP04085 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.74■□□□□ 0.11
PDGFAP04085 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.74■□□□□ 0.11
PDGFAP04085 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.74■□□□□ 0.11
PDGFAP04085 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.74■□□□□ 0.11
PDGFAP04085 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 AC015911.4-201ENST00000588022 1070 ntBASIC15.74■□□□□ 0.11
PDGFAP04085 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PDGFAP04085 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.74■□□□□ 0.11
PDGFAP04085 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.74■□□□□ 0.11
PDGFAP04085 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDGFAP04085 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
PDGFAP04085 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFAP04085 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFAP04085 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms