Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL1A1P02452 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20■□□□□ 0.79
COL1A1P02452 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20■□□□□ 0.79
COL1A1P02452 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL1A1P02452 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20■□□□□ 0.79
COL1A1P02452 AC105020.1-201ENST00000435356 2205 ntBASIC20■□□□□ 0.79
COL1A1P02452 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL1A1P02452 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 RNF216P1-203ENST00000404404 2427 ntBASIC20■□□□□ 0.79
COL1A1P02452 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20■□□□□ 0.79
COL1A1P02452 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A1P02452 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 AC093724.1-201ENST00000448659 1027 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 GPAA1P2-202ENST00000606848 1787 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 PIN1P1-201ENST00000412108 996 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 COX5BP8-201ENST00000416911 349 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.99■□□□□ 0.79
COL1A1P02452 MEIS3P1-201ENST00000495167 958 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A1P02452 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A1P02452 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 AL138828.2-201ENST00000615812 383 ntBASIC19.99■□□□□ 0.79
COL1A1P02452 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL1A1P02452 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL1A1P02452 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.98■□□□□ 0.79
COL1A1P02452 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.98■□□□□ 0.79
COL1A1P02452 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.98■□□□□ 0.79
COL1A1P02452 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL1A1P02452 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms