Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRACP01848 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.95□□□□□ -0.66
TRACP01848 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.95□□□□□ -0.66
TRACP01848 AC092368.3-202ENST00000574180 1591 ntBASIC10.94□□□□□ -0.66
TRACP01848 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 AC023908.3-201ENST00000564211 3047 ntBASIC10.94□□□□□ -0.66
TRACP01848 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC10.94□□□□□ -0.66
TRACP01848 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC10.94□□□□□ -0.66
TRACP01848 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
TRACP01848 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 AC004951.3-201ENST00000418645 1148 ntBASIC10.94□□□□□ -0.66
TRACP01848 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 AC137761.2-201ENST00000561729 223 ntBASIC10.94□□□□□ -0.66
TRACP01848 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 AC145350.3-201ENST00000569033 163 ntBASIC10.94□□□□□ -0.66
TRACP01848 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC10.94□□□□□ -0.66
TRACP01848 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 WWOX-218ENST00000627394 894 ntTSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TRACP01848 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
TRACP01848 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRACP01848 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRACP01848 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
TRACP01848 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 AC006486.2-201ENST00000624246 2199 ntBASIC10.93□□□□□ -0.66
TRACP01848 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 AC002310.6-201ENST00000624451 1377 ntBASIC10.93□□□□□ -0.66
TRACP01848 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 TUBB8P12-201ENST00000308911 1335 ntBASIC10.93□□□□□ -0.66
TRACP01848 TUBB7P-202ENST00000428444 1305 ntBASIC10.93□□□□□ -0.66
TRACP01848 TUBB8P7-204ENST00000567960 1332 ntBASIC10.93□□□□□ -0.66
TRACP01848 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
TRACP01848 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRACP01848 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 F2R-202ENST00000505600 442 ntTSL 2 BASIC10.93□□□□□ -0.66
TRACP01848 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRACP01848 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC10.93□□□□□ -0.66
TRACP01848 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms