Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR346-201ENST00000362234 95 ntBASIC16.34■□□□□ 0.21
TNFP01375 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TNFP01375 SPDYE7P-202ENST00000420373 878 ntBASIC16.34■□□□□ 0.21
TNFP01375 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.34■□□□□ 0.21
TNFP01375 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.34■□□□□ 0.21
TNFP01375 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.34■□□□□ 0.21
TNFP01375 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.34■□□□□ 0.21
TNFP01375 AC026150.2-201ENST00000564693 1156 ntBASIC16.34■□□□□ 0.21
TNFP01375 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.34■□□□□ 0.21
TNFP01375 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 TUBB3P1-201ENST00000405796 1332 ntBASIC16.34■□□□□ 0.21
TNFP01375 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFP01375 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TNFP01375 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.34■□□□□ 0.21
TNFP01375 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
TNFP01375 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFP01375 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFP01375 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.33■□□□□ 0.21
TNFP01375 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TNFP01375 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TNFP01375 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFP01375 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFP01375 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TNFP01375 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TNFP01375 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
TNFP01375 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.33■□□□□ 0.2
TNFP01375 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.33■□□□□ 0.2
TNFP01375 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.33■□□□□ 0.2
TNFP01375 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.33■□□□□ 0.2
TNFP01375 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
TNFP01375 AL138918.1-201ENST00000568306 659 ntBASIC16.33■□□□□ 0.2
TNFP01375 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFP01375 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 KRT8P39-201ENST00000396270 1433 ntBASIC16.33■□□□□ 0.2
TNFP01375 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.33■□□□□ 0.2
TNFP01375 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFP01375 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFP01375 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFP01375 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TNFP01375 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFP01375 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TNFP01375 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFP01375 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFP01375 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFP01375 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFP01375 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 AC105233.2-201ENST00000523697 349 ntBASIC16.32■□□□□ 0.2
TNFP01375 AF228730.5-201ENST00000530288 346 ntBASIC16.32■□□□□ 0.2
TNFP01375 ALG1L8P-201ENST00000533887 760 ntBASIC16.32■□□□□ 0.2
TNFP01375 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFP01375 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFP01375 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFP01375 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFP01375 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFP01375 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.31■□□□□ 0.2
TNFP01375 PCDHB17P-201ENST00000539533 2393 ntBASIC16.31■□□□□ 0.2
TNFP01375 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFP01375 CROCCP1-201ENST00000426910 5675 ntBASIC16.31■□□□□ 0.2
TNFP01375 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNFP01375 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFP01375 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFP01375 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFP01375 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFP01375 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms