Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.84□□□□□ -0.03
KDM4BO94953 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.84□□□□□ -0.03
KDM4BO94953 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 AC111152.3-201ENST00000569699 673 ntBASIC14.84□□□□□ -0.03
KDM4BO94953 AC011840.4-201ENST00000578471 627 ntBASIC14.84□□□□□ -0.03
KDM4BO94953 AC005336.2-201ENST00000593183 939 ntBASIC14.84□□□□□ -0.03
KDM4BO94953 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.84□□□□□ -0.03
KDM4BO94953 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.84□□□□□ -0.03
KDM4BO94953 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM4BO94953 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM4BO94953 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
KDM4BO94953 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.83□□□□□ -0.03
KDM4BO94953 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KDM4BO94953 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KDM4BO94953 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KDM4BO94953 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KDM4BO94953 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM4BO94953 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.83□□□□□ -0.04
KDM4BO94953 AC246785.2-201ENST00000432512 513 ntBASIC14.83□□□□□ -0.04
KDM4BO94953 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.83□□□□□ -0.04
KDM4BO94953 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 AC109462.3-201ENST00000573934 613 ntBASIC14.83□□□□□ -0.04
KDM4BO94953 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 AL121956.5-201ENST00000625261 221 ntBASIC14.83□□□□□ -0.04
KDM4BO94953 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM4BO94953 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.83□□□□□ -0.04
KDM4BO94953 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KDM4BO94953 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KDM4BO94953 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM4BO94953 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KDM4BO94953 PAUPAR-201ENST00000630360 2965 ntBASIC14.82□□□□□ -0.04
KDM4BO94953 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDM4BO94953 AC067930.6-201ENST00000623257 4947 ntBASIC14.82□□□□□ -0.04
KDM4BO94953 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KDM4BO94953 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.82□□□□□ -0.04
KDM4BO94953 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KDM4BO94953 FAM220CP-201ENST00000395253 831 ntBASIC14.82□□□□□ -0.04
KDM4BO94953 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.82□□□□□ -0.04
KDM4BO94953 AC103564.2-201ENST00000432853 1299 ntBASIC14.82□□□□□ -0.04
KDM4BO94953 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.82□□□□□ -0.04
KDM4BO94953 AC124947.2-201ENST00000547118 1133 ntBASIC14.82□□□□□ -0.04
KDM4BO94953 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
KDM4BO94953 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM4BO94953 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM4BO94953 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM4BO94953 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
KDM4BO94953 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms