Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TERF1P1-201ENST00000311003 1181 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ZNF253O75346 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 TSPY5P-201ENST00000426936 936 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 AC117947.1-201ENST00000427448 529 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.16□□□□□ -0.3
ZNF253O75346 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF253O75346 AP002490.2-201ENST00000524791 560 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF253O75346 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.16□□□□□ -0.3
ZNF253O75346 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF253O75346 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
ZNF253O75346 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ZNF253O75346 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 FAM220CP-201ENST00000395253 831 ntBASIC13.15□□□□□ -0.3
ZNF253O75346 AL596275.1-201ENST00000423464 877 ntBASIC13.15□□□□□ -0.3
ZNF253O75346 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 AC112907.2-201ENST00000448639 330 ntBASIC13.15□□□□□ -0.3
ZNF253O75346 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.15□□□□□ -0.3
ZNF253O75346 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 STK25P1-201ENST00000585406 838 ntBASIC13.15□□□□□ -0.3
ZNF253O75346 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF253O75346 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF253O75346 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF253O75346 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.15□□□□□ -0.31
ZNF253O75346 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
ZNF253O75346 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF253O75346 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.14□□□□□ -0.31
ZNF253O75346 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 AC073508.3-201ENST00000619697 1419 ntBASIC13.14□□□□□ -0.31
ZNF253O75346 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF253O75346 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms