Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 AC254562.1-201ENST00000417586 456 ntBASIC15.07■□□□□ 0
ZIC3O60481 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.07■□□□□ 0
ZIC3O60481 DNAJB3-202ENST00000449667 1266 ntBASIC15.07■□□□□ 0
ZIC3O60481 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.07■□□□□ 0
ZIC3O60481 KRT8P48-201ENST00000515599 1220 ntBASIC15.07■□□□□ 0
ZIC3O60481 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.07■□□□□ 0
ZIC3O60481 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ZIC3O60481 AC243562.1-201ENST00000560672 389 ntBASIC15.07■□□□□ 0
ZIC3O60481 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.07■□□□□ 0
ZIC3O60481 AC026120.1-201ENST00000611536 926 ntBASIC15.07■□□□□ 0
ZIC3O60481 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.07■□□□□ 0
ZIC3O60481 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZIC3O60481 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZIC3O60481 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
ZIC3O60481 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
ZIC3O60481 AC006538.1-201ENST00000567905 1585 ntBASIC15.07■□□□□ 0
ZIC3O60481 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ZIC3O60481 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
ZIC3O60481 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.06■□□□□ 0
ZIC3O60481 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 AP001160.2-201ENST00000596071 487 ntBASIC15.06■□□□□ 0
ZIC3O60481 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 AL513210.1-201ENST00000629608 234 ntBASIC15.06■□□□□ 0
ZIC3O60481 AC079781.4-201ENST00000641908 219 ntBASIC15.06■□□□□ 0
ZIC3O60481 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 WASH6P-202ENST00000359512 1437 ntBASIC15.06■□□□□ 0
ZIC3O60481 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.06■□□□□ 0
ZIC3O60481 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
ZIC3O60481 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ZIC3O60481 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZIC3O60481 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.05■□□□□ 0
ZIC3O60481 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.05■□□□□ 0
ZIC3O60481 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ZIC3O60481 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ZIC3O60481 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
ZIC3O60481 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.05■□□□□ 0
ZIC3O60481 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.05■□□□□ 0
ZIC3O60481 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms