Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.92■□□□□ 0.3
SMAD6O43541 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 AC078925.2-201ENST00000624013 1973 ntBASIC16.91■□□□□ 0.3
SMAD6O43541 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMAD6O43541 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.91■□□□□ 0.3
SMAD6O43541 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.91■□□□□ 0.3
SMAD6O43541 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 AC021097.1-201ENST00000607902 574 ntBASIC16.91■□□□□ 0.3
SMAD6O43541 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
SMAD6O43541 KRT18P28-201ENST00000453838 1332 ntBASIC16.91■□□□□ 0.3
SMAD6O43541 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMAD6O43541 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD6O43541 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 AL512652.2-201ENST00000625156 1716 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.9■□□□□ 0.3
SMAD6O43541 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 OR6D1P-202ENST00000641007 5290 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.9■□□□□ 0.3
SMAD6O43541 SPCS2P4-201ENST00000436160 681 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 AL592309.1-201ENST00000443127 649 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 RN7SL589P-201ENST00000481268 310 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 AP002490.2-201ENST00000524791 560 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.9■□□□□ 0.3
SMAD6O43541 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
SMAD6O43541 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD6O43541 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 AC106886.4-201ENST00000623557 2502 ntBASIC16.9■□□□□ 0.3
SMAD6O43541 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD6O43541 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMAD6O43541 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMAD6O43541 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SMAD6O43541 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms