Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC3O15379 AP000867.4-201ENST00000641616 219 ntBASIC16.39■□□□□ 0.21
HDAC3O15379 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC3O15379 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HDAC3O15379 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC3O15379 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC3O15379 AC002310.6-201ENST00000624451 1377 ntBASIC16.38■□□□□ 0.21
HDAC3O15379 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC3O15379 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.38■□□□□ 0.21
HDAC3O15379 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 CHCHD2P8-201ENST00000429873 447 ntBASIC16.38■□□□□ 0.21
HDAC3O15379 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC3O15379 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 LINC01238-205ENST00000567549 1107 ntBASIC16.38■□□□□ 0.21
HDAC3O15379 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HDAC3O15379 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC3O15379 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC3O15379 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.38■□□□□ 0.21
HDAC3O15379 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.38■□□□□ 0.21
HDAC3O15379 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDAC3O15379 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 SIGLEC16-201ENST00000599858 1437 ntBASIC16.37■□□□□ 0.21
HDAC3O15379 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.37■□□□□ 0.21
HDAC3O15379 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HDAC3O15379 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 GGT4P-201ENST00000623672 1708 ntBASIC16.37■□□□□ 0.21
HDAC3O15379 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.37■□□□□ 0.21
HDAC3O15379 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.37■□□□□ 0.21
HDAC3O15379 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.37■□□□□ 0.21
HDAC3O15379 TERC-201ENST00000602385 541 ntBASIC16.37■□□□□ 0.21
HDAC3O15379 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC3O15379 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC3O15379 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC3O15379 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC3O15379 AC243591.1-201ENST00000452967 1364 ntBASIC16.37■□□□□ 0.21
HDAC3O15379 TSPY26P-202ENST00000565928 3884 ntBASIC16.37■□□□□ 0.21
HDAC3O15379 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC3O15379 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.36■□□□□ 0.21
HDAC3O15379 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HDAC3O15379 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.36■□□□□ 0.21
HDAC3O15379 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC3O15379 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC3O15379 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC3O15379 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC3O15379 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HDAC3O15379 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC3O15379 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC3O15379 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms