Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHD2O14647 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHD2O14647 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD2O14647 BRWD1P1-201ENST00000401091 371 ntBASIC22.89■■□□□ 1.25
CHD2O14647 FAM21FP-201ENST00000426241 1131 ntBASIC22.89■■□□□ 1.25
CHD2O14647 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHD2O14647 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CHD2O14647 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD2O14647 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.89■■□□□ 1.25
CHD2O14647 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD2O14647 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD2O14647 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD2O14647 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.88■■□□□ 1.25
CHD2O14647 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 HLA-DPB2-205ENST00000435074 1188 ntBASIC22.88■■□□□ 1.25
CHD2O14647 KLF2P4-201ENST00000451959 1225 ntBASIC22.88■■□□□ 1.25
CHD2O14647 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 ABBA01031660.1-201ENST00000635219 756 ntBASIC22.88■■□□□ 1.25
CHD2O14647 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC22.88■■□□□ 1.25
CHD2O14647 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.88■■□□□ 1.25
CHD2O14647 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CHD2O14647 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.88■■□□□ 1.25
CHD2O14647 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHD2O14647 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC22.87■■□□□ 1.25
CHD2O14647 RPL7P3-201ENST00000441388 714 ntBASIC22.87■■□□□ 1.25
CHD2O14647 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC22.87■■□□□ 1.25
CHD2O14647 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC22.87■■□□□ 1.25
CHD2O14647 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC22.87■■□□□ 1.25
CHD2O14647 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
CHD2O14647 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 AC005229.1-201ENST00000392885 409 ntBASIC22.87■■□□□ 1.25
CHD2O14647 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD2O14647 GOLGA2P4-201ENST00000441462 777 ntBASIC22.87■■□□□ 1.25
CHD2O14647 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 BTNL10-201ENST00000595971 695 ntBASIC22.87■■□□□ 1.25
CHD2O14647 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.87■■□□□ 1.25
CHD2O14647 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD2O14647 Z97205.2-201ENST00000564697 1639 ntBASIC22.86■■□□□ 1.25
CHD2O14647 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CHD2O14647 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.86■■□□□ 1.25
CHD2O14647 AC087289.5-201ENST00000586076 3175 ntBASIC22.86■■□□□ 1.25
CHD2O14647 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 AGER-214ENST00000538695 487 ntTSL 2 BASIC22.86■■□□□ 1.25
CHD2O14647 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC22.86■■□□□ 1.25
CHD2O14647 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHD2O14647 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
CHD2O14647 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CHD2O14647 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CHD2O14647 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22.85■■□□□ 1.25
CHD2O14647 AL139010.1-201ENST00000454878 894 ntBASIC22.85■■□□□ 1.25
CHD2O14647 FO681548.1-201ENST00000455617 1132 ntBASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms