Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC104596.2-201ENST00000512793 793 ntBASIC28.22■■■□□ 2.11
CUX2O14529 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 HLA-C-210ENST00000640219 976 ntBASIC28.22■■■□□ 2.11
CUX2O14529 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CUX2O14529 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 AL607033.1-201ENST00000623900 1599 ntBASIC28.22■■■□□ 2.11
CUX2O14529 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CUX2O14529 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CUX2O14529 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CUX2O14529 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC28.22■■■□□ 2.11
CUX2O14529 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CUX2O14529 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CUX2O14529 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CUX2O14529 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
CUX2O14529 BCRP2-202ENST00000447763 634 ntBASIC28.21■■■□□ 2.11
CUX2O14529 BCRP6-201ENST00000510112 632 ntBASIC28.21■■■□□ 2.11
CUX2O14529 BCRP7-201ENST00000511549 544 ntBASIC28.21■■■□□ 2.11
CUX2O14529 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC28.21■■■□□ 2.11
CUX2O14529 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CUX2O14529 AC018635.2-201ENST00000608625 364 ntBASIC28.21■■■□□ 2.11
CUX2O14529 AC090164.3-201ENST00000610780 2143 ntBASIC28.21■■■□□ 2.11
CUX2O14529 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC28.21■■■□□ 2.11
CUX2O14529 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CUX2O14529 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
CUX2O14529 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUX2O14529 APOA1-205ENST00000375329 927 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC28.21■■■□□ 2.11
CUX2O14529 RNA5SP410-201ENST00000516285 106 ntBASIC28.21■■■□□ 2.11
CUX2O14529 AC068587.3-201ENST00000526613 355 ntBASIC28.21■■■□□ 2.11
CUX2O14529 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC28.21■■■□□ 2.11
CUX2O14529 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC28.21■■■□□ 2.11
CUX2O14529 MIR4492-201ENST00000581627 80 ntBASIC28.21■■■□□ 2.11
CUX2O14529 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC28.21■■■□□ 2.11
CUX2O14529 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CUX2O14529 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUX2O14529 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUX2O14529 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CUX2O14529 TP73-213ENST00000604479 1623 ntTSL 5 BASIC28.2■■■□□ 2.11
CUX2O14529 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CUX2O14529 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
CUX2O14529 RPL28-203ENST00000428193 573 ntTSL 2 BASIC28.2■■■□□ 2.1
CUX2O14529 AL442647.2-201ENST00000429864 857 ntBASIC28.2■■■□□ 2.1
CUX2O14529 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC28.2■■■□□ 2.1
CUX2O14529 HIST2H2BC-201ENST00000498492 580 ntBASIC28.2■■■□□ 2.1
CUX2O14529 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC28.2■■■□□ 2.1
CUX2O14529 RPL28-207ENST00000558815 616 ntTSL 2 BASIC28.2■■■□□ 2.1
CUX2O14529 MIR4750-201ENST00000584564 56 ntBASIC28.2■■■□□ 2.1
CUX2O14529 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CUX2O14529 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC28.19■■■□□ 2.1
CUX2O14529 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC28.19■■■□□ 2.1
CUX2O14529 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 AC026954.1-201ENST00000429771 1293 ntBASIC28.19■■■□□ 2.1
CUX2O14529 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC28.19■■■□□ 2.1
CUX2O14529 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC28.19■■■□□ 2.1
CUX2O14529 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC28.19■■■□□ 2.1
CUX2O14529 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC28.19■■■□□ 2.1
CUX2O14529 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CUX2O14529 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
CUX2O14529 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUX2O14529 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
CUX2O14529 HARS-202ENST00000415192 1401 ntTSL 2 BASIC28.18■■■□□ 2.1
CUX2O14529 HARS-204ENST00000438307 1789 ntTSL 2 BASIC28.18■■■□□ 2.1
CUX2O14529 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC28.18■■■□□ 2.1
CUX2O14529 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms