Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.64■□□□□ 0.41
SOX1O00570 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.64■□□□□ 0.41
SOX1O00570 AC098859.1-201ENST00000502915 1238 ntBASIC17.64■□□□□ 0.41
SOX1O00570 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.64■□□□□ 0.41
SOX1O00570 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.64■□□□□ 0.41
SOX1O00570 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SOX1O00570 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.64■□□□□ 0.41
SOX1O00570 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.64■□□□□ 0.41
SOX1O00570 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.64■□□□□ 0.41
SOX1O00570 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.64■□□□□ 0.41
SOX1O00570 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.64■□□□□ 0.41
SOX1O00570 AL139327.4-201ENST00000612362 153 ntBASIC17.64■□□□□ 0.41
SOX1O00570 CU634019.7-201ENST00000624153 1185 ntBASIC17.64■□□□□ 0.41
SOX1O00570 FP236241.2-201ENST00000624906 1185 ntBASIC17.64■□□□□ 0.41
SOX1O00570 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SOX1O00570 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.64■□□□□ 0.41
SOX1O00570 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SOX1O00570 AC131009.4-201ENST00000624048 1740 ntBASIC17.64■□□□□ 0.41
SOX1O00570 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX1O00570 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
SOX1O00570 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SOX1O00570 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SOX1O00570 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.63■□□□□ 0.41
SOX1O00570 CHMP4BP1-201ENST00000556017 588 ntBASIC17.63■□□□□ 0.41
SOX1O00570 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX1O00570 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX1O00570 RARRES2P5-201ENST00000564013 466 ntBASIC17.63■□□□□ 0.41
SOX1O00570 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 AC244452.3-201ENST00000636814 210 ntBASIC17.63■□□□□ 0.41
SOX1O00570 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX1O00570 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SOX1O00570 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SOX1O00570 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX1O00570 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX1O00570 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX1O00570 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.62■□□□□ 0.41
SOX1O00570 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX1O00570 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.62■□□□□ 0.41
SOX1O00570 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX1O00570 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SOX1O00570 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX1O00570 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SOX1O00570 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX1O00570 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX1O00570 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SOX1O00570 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms