Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ELK1P1-201ENST00000485699 580 ntBASIC22.46■■□□□ 1.19
SBNO1A3KN83 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SBNO1A3KN83 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SBNO1A3KN83 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SBNO1A3KN83 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC22.46■■□□□ 1.19
SBNO1A3KN83 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
SBNO1A3KN83 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 CROCCP2-202ENST00000412962 2773 ntBASIC22.45■■□□□ 1.18
SBNO1A3KN83 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 KRT8P12-202ENST00000472924 1397 ntBASIC22.45■■□□□ 1.18
SBNO1A3KN83 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 SPDYE17-201ENST00000412399 783 ntBASIC22.45■■□□□ 1.18
SBNO1A3KN83 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 RHBDF1P1-201ENST00000427504 1941 ntBASIC22.45■■□□□ 1.18
SBNO1A3KN83 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SBNO1A3KN83 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SBNO1A3KN83 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 AC013467.2-201ENST00000605472 835 ntBASIC22.44■■□□□ 1.18
SBNO1A3KN83 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.44■■□□□ 1.18
SBNO1A3KN83 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SBNO1A3KN83 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 MEP1AP4-201ENST00000423244 1087 ntBASIC22.43■■□□□ 1.18
SBNO1A3KN83 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 FTH1-202ENST00000526640 786 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 ORC6-206ENST00000568364 888 ntTSL 5 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 CTBP2P3-201ENST00000585629 1255 ntBASIC22.43■■□□□ 1.18
SBNO1A3KN83 AL033527.5-202ENST00000641632 1098 ntBASIC22.43■■□□□ 1.18
SBNO1A3KN83 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SBNO1A3KN83 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.43■■□□□ 1.18
SBNO1A3KN83 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 AC023310.3-201ENST00000557027 670 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms