Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC097637.2-201ENST00000624096 1997 ntBASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MIR3687-2-201ENST00000577708 61 ntBASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MIR3687-1-201ENST00000614492 61 ntBASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.55□□□□□ -0.24
TCRBV4S1A1TA0A5B7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC006504.4-201ENST00000592118 1568 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC009336.1-201ENST00000608941 1553 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms