Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 SNX33P1-201ENST00000592116 1762 ntBASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 FAM197Y3-203ENST00000618346 717 ntBASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC196A0A1B0GTZ2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 RNA5SP416-201ENST00000516838 111 ntBASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC196A0A1B0GTZ2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC124067.4-201ENST00000519691 2379 ntBASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC007967.2-201ENST00000432613 625 ntBASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC196A0A1B0GTZ2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms